Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
StrcQ8VIM6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
StrcQ8VIM6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
StrcQ8VIM6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
StrcQ8VIM6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm12453-201ENSMUST00000121981 331 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm28937-201ENSMUST00000185413 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm29400-201ENSMUST00000187208 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm28662-201ENSMUST00000188446 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm28251-201ENSMUST00000188835 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm5700-201ENSMUST00000191483 989 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm37318-201ENSMUST00000194325 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm38017-201ENSMUST00000194768 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm37287-201ENSMUST00000195449 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm37793-201ENSMUST00000195548 695 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm6390-201ENSMUST00000215034 589 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm14005-208ENSMUST00000223654 681 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.53□□□□□ -0.08
StrcQ8VIM6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
StrcQ8VIM6 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
StrcQ8VIM6 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Gm25604-201ENSMUST00000158359 133 ntBASIC14.52□□□□□ -0.08
StrcQ8VIM6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Gm5870-201ENSMUST00000196461 282 ntBASIC14.52□□□□□ -0.08
StrcQ8VIM6 Gm6855-201ENSMUST00000206307 790 ntBASIC14.52□□□□□ -0.08
StrcQ8VIM6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.52□□□□□ -0.08
StrcQ8VIM6 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
StrcQ8VIM6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Gm24791-201ENSMUST00000104284 131 ntBASIC14.52□□□□□ -0.09
StrcQ8VIM6 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Gm24248-201ENSMUST00000157321 322 ntBASIC14.52□□□□□ -0.09
StrcQ8VIM6 Gm7719-201ENSMUST00000182374 975 ntBASIC14.52□□□□□ -0.09
StrcQ8VIM6 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Gm7082-201ENSMUST00000209880 969 ntBASIC14.52□□□□□ -0.09
StrcQ8VIM6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.52□□□□□ -0.09
StrcQ8VIM6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.51□□□□□ -0.09
StrcQ8VIM6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.51□□□□□ -0.09
StrcQ8VIM6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.51□□□□□ -0.09
StrcQ8VIM6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.51□□□□□ -0.09
StrcQ8VIM6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
StrcQ8VIM6 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms