Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.71□□□□□ -0.38
Rpa1Q8VEE4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa1Q8VEE4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms