Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup35Q8R4R6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gm14704-201ENSMUST00000120300 874 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gm43575-201ENSMUST00000196420 516 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gm19220-201ENSMUST00000222682 803 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup35Q8R4R6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Gm6152-201ENSMUST00000151704 340 ntBASIC10.21□□□□□ -0.77
Nup35Q8R4R6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Mir8102-201ENSMUST00000184148 139 ntBASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Gm18307-201ENSMUST00000206864 949 ntBASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nup35Q8R4R6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms