Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Zcchc9Q8R1J3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm8099-201ENSMUST00000200510 742 ntBASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zcchc9Q8R1J3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gm12176-201ENSMUST00000121420 875 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms