Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm7467-201ENSMUST00000185173 652 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm4157-201ENSMUST00000211647 679 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vopp1Q8R1C3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm23912-201ENSMUST00000104687 87 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm12501-201ENSMUST00000119163 529 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm5051-201ENSMUST00000204085 485 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vopp1Q8R1C3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vopp1Q8R1C3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms