Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm8227-201ENSMUST00000223306 571 ntBASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm26035-201ENSMUST00000083065 308 ntBASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm13297-201ENSMUST00000120205 934 ntBASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.36■□□□□ 0.05
Sf3a1Q8K4Z5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm15370-201ENSMUST00000117158 253 ntBASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm13315-201ENSMUST00000120376 991 ntBASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm11597-201ENSMUST00000121423 964 ntBASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms