Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm12291-201ENSMUST00000121627 311 ntBASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm10253-201ENSMUST00000194270 940 ntBASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm27321-201ENSMUST00000185021 205 ntBASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Chchd1-203ENSMUST00000224633 557 ntBASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf4Q8K4J2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm44344-201ENSMUST00000200287 129 ntBASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms