Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm23931-201ENSMUST00000103842 109 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm7029-201ENSMUST00000173226 450 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm28693-202ENSMUST00000190758 331 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm19931-201ENSMUST00000198920 368 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.67□□□□□ -0.38
Clip4Q8CI96 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.67□□□□□ -0.38
Clip4Q8CI96 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip4Q8CI96 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm5187-201ENSMUST00000117317 991 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm11637-201ENSMUST00000120601 592 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm17420-201ENSMUST00000164753 153 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Gm6458-201ENSMUST00000211573 635 ntBASIC12.66□□□□□ -0.38
Clip4Q8CI96 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip4Q8CI96 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm13392-201ENSMUST00000117708 150 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm16479-201ENSMUST00000121706 932 ntBASIC12.65□□□□□ -0.38
Clip4Q8CI96 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip4Q8CI96 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms