Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox30Q8CGW4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Gm12314-201ENSMUST00000118104 538 ntBASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox30Q8CGW4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Gm9083-201ENSMUST00000120423 819 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Gm26927-201ENSMUST00000182385 965 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.68□□□□□ -0.22
Sox30Q8CGW4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms