Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm22331-201ENSMUST00000158066 136 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm9630-201ENSMUST00000178304 885 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gm9257-201ENSMUST00000221254 232 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcpip1Q8CDG3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcpip1Q8CDG3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms