Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Gm20482-202ENSMUST00000174729 825 ntBASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Mospd4-201ENSMUST00000180618 576 ntBASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps53Q8CCB4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Mir5132-201ENSMUST00000175166 71 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm18753-201ENSMUST00000201000 566 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps53Q8CCB4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms