Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm8738-201ENSMUST00000172606 329 ntBASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm3890-201ENSMUST00000182416 207 ntBASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf3Q8C120 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf3Q8C120 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf3Q8C120 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf3Q8C120 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm22018-201ENSMUST00000104357 131 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm25857-201ENSMUST00000082788 129 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm26035-201ENSMUST00000083065 308 ntBASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf3Q8C120 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms