Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gm13296-201ENSMUST00000117854 997 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Gm8385-201ENSMUST00000058999 643 ntBASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf2Q8BZT2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm13996-201ENSMUST00000118456 430 ntBASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm18753-201ENSMUST00000201000 566 ntBASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf2Q8BZT2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms