Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm29705-201ENSMUST00000212598 474 ntBASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm27731-201ENSMUST00000185192 107 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm6458-201ENSMUST00000211573 635 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trerf1Q8BXJ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Snora78-201ENSMUST00000158630 128 ntBASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm43818-201ENSMUST00000200605 466 ntBASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trerf1Q8BXJ2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms