Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim6Q8BGE7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim6Q8BGE7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm14057-201ENSMUST00000120631 482 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm15429-201ENSMUST00000151268 798 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm6152-201ENSMUST00000151704 340 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim6Q8BGE7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim6Q8BGE7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trim6Q8BGE7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim6Q8BGE7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim6Q8BGE7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms