Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atg4bQ8BGE6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atg4bQ8BGE6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Atg4bQ8BGE6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atg4bQ8BGE6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm8018-201ENSMUST00000173536 789 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atg4bQ8BGE6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm6023-201ENSMUST00000118217 606 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm11597-201ENSMUST00000121423 964 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm13316-201ENSMUST00000140537 691 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm27572-201ENSMUST00000183702 255 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm38158-201ENSMUST00000194617 339 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm44405-201ENSMUST00000198952 126 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm18054-201ENSMUST00000207539 555 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm45925-201ENSMUST00000218882 744 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm45930-201ENSMUST00000221330 292 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gm9823-201ENSMUST00000051212 327 ntBASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atg4bQ8BGE6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms