Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.63□□□□□ -0.39
Usp8Q80U87 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Gm10156-201ENSMUST00000122364 462 ntBASIC12.63□□□□□ -0.39
Usp8Q80U87 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp8Q80U87 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.63□□□□□ -0.39
Usp8Q80U87 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.63□□□□□ -0.39
Usp8Q80U87 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Gm5356-201ENSMUST00000093326 615 ntBASIC12.62□□□□□ -0.39
Usp8Q80U87 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Usp8Q80U87 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp8Q80U87 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm12291-201ENSMUST00000121627 311 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm13123-201ENSMUST00000122173 492 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Mir1894-201ENSMUST00000122802 81 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm37922-201ENSMUST00000195596 455 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm17794-201ENSMUST00000220252 955 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp8Q80U87 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp8Q80U87 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.61□□□□□ -0.39
Usp8Q80U87 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms