Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh19Q80TF3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms