Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm14017-201ENSMUST00000121934 386 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm24845-201ENSMUST00000158034 109 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm44651-201ENSMUST00000207343 372 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm26361-201ENSMUST00000158868 186 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms