Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rad54bQ6PFE3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Rad54bQ6PFE3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rad54bQ6PFE3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rad54bQ6PFE3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Gm5356-201ENSMUST00000093326 615 ntBASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.63□□□□□ -0.39
Rad54bQ6PFE3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms