Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gm13612-201ENSMUST00000119276 390 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smarcd3Q6P9Z1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm9630-201ENSMUST00000178304 885 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smarcd3Q6P9Z1 Daam2-202ENSMUST00000224595 1926 ntBASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smarcd3Q6P9Z1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms