Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp49Q6P9L4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm13736-201ENSMUST00000119272 253 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm8018-201ENSMUST00000173536 789 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm27243-201ENSMUST00000183964 521 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm45331-201ENSMUST00000209868 554 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp49Q6P9L4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm13316-201ENSMUST00000140537 691 ntBASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.03□□□□□ -0.16
Usp49Q6P9L4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp49Q6P9L4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms