Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm14247-201ENSMUST00000120950 237 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm17877-201ENSMUST00000192578 814 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm44421-201ENSMUST00000205064 1221 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 AC112945.1-201ENSMUST00000226413 514 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 n-R5s211-201ENSMUST00000093689 119 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm10152-201ENSMUST00000193475 1344 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Mir671-201ENSMUST00000102432 98 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm11980-201ENSMUST00000121445 986 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm18711-201ENSMUST00000199341 750 ntBASIC18.98■□□□□ 0.63
Slx4Q6P1D7 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Gm14193-201ENSMUST00000105067 153 ntBASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Gm7541-201ENSMUST00000118361 535 ntBASIC18.97■□□□□ 0.63
Slx4Q6P1D7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Gm8531-201ENSMUST00000188319 893 ntBASIC18.97■□□□□ 0.63
Slx4Q6P1D7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slx4Q6P1D7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Ighv2-1-201ENSMUST00000170946 353 ntBASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC18.96■□□□□ 0.63
Slx4Q6P1D7 AC121960.1-201ENSMUST00000227982 564 ntBASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slx4Q6P1D7 Gm7278-201ENSMUST00000119836 1401 ntBASIC18.96■□□□□ 0.62
Slx4Q6P1D7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Gm18198-201ENSMUST00000204986 1551 ntBASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Gm12419-201ENSMUST00000116649 636 ntBASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC18.95■□□□□ 0.62
Slx4Q6P1D7 Gm22442-201ENSMUST00000157256 144 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms