Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm22133-201ENSMUST00000102082 109 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm23596-201ENSMUST00000104304 132 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm12314-201ENSMUST00000118104 538 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm14921-201ENSMUST00000118643 908 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Snora73b-201ENSMUST00000083419 205 ntBASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf8Q6DID3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scaf8Q6DID3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm3344-201ENSMUST00000169610 603 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm43962-201ENSMUST00000203898 190 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm9996-201ENSMUST00000070359 913 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scaf8Q6DID3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm25880-201ENSMUST00000104331 132 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm28925-201ENSMUST00000188586 168 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Gm3793-201ENSMUST00000204973 672 ntBASIC14.69□□□□□ -0.06
Scaf8Q6DID3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms