Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm15370-201ENSMUST00000117158 253 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm9440-201ENSMUST00000119667 539 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Mir8109-201ENSMUST00000184375 117 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.32□□□□□ -0.28
Scube3Q66PY1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scube3Q66PY1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm14301-201ENSMUST00000120181 324 ntBASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm13297-201ENSMUST00000120205 934 ntBASIC13.31□□□□□ -0.28
Scube3Q66PY1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm44405-201ENSMUST00000198952 126 ntBASIC13.31□□□□□ -0.28
Scube3Q66PY1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.31□□□□□ -0.28
Scube3Q66PY1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scube3Q66PY1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scube3Q66PY1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm10434-201ENSMUST00000101158 471 ntBASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm37489-201ENSMUST00000191883 159 ntBASIC13.3□□□□□ -0.28
Scube3Q66PY1 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm34272-201ENSMUST00000208886 253 ntBASIC13.3□□□□□ -0.28
Scube3Q66PY1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.3□□□□□ -0.28
Scube3Q66PY1 Gm7046-201ENSMUST00000221351 977 ntBASIC13.3□□□□□ -0.28
Scube3Q66PY1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scube3Q66PY1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms