Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Rai1Q61818 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Gm12579-201ENSMUST00000118040 783 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.97□□□□□ -0.49
Rai1Q61818 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Rai1Q61818 Gm38210-201ENSMUST00000191944 809 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 Gm2965-201ENSMUST00000198365 343 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Gm4157-201ENSMUST00000211647 679 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.97□□□□□ -0.49
Rai1Q61818 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.97□□□□□ -0.49
Rai1Q61818 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rai1Q61818 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm26286-201ENSMUST00000104166 134 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.96□□□□□ -0.49
Rai1Q61818 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm12164-201ENSMUST00000121695 551 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Gm7593-201ENSMUST00000187246 644 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Gm26448-201ENSMUST00000082446 203 ntBASIC11.96□□□□□ -0.49
Rai1Q61818 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rai1Q61818 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.96□□□□□ -0.49
Rai1Q61818 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.96□□□□□ -0.5
Rai1Q61818 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.96□□□□□ -0.5
Rai1Q61818 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Rai1Q61818 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rai1Q61818 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.96□□□□□ -0.5
Rai1Q61818 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rai1Q61818 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm11511-201ENSMUST00000118146 540 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm7666-201ENSMUST00000146631 819 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms