Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm11814-201ENSMUST00000119515 929 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm45784-201ENSMUST00000188360 142 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.5□□□□□ -0.89
Foxc1Q61572 AC121986.1-201ENSMUST00000218588 781 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 AC173482.2-201ENSMUST00000224044 750 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm16372-201ENSMUST00000073088 450 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm7171-201ENSMUST00000177413 1349 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.5□□□□□ -0.89
Foxc1Q61572 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm37960-201ENSMUST00000192402 1897 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Foxc1Q61572 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Mup-ps15-201ENSMUST00000121741 539 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm8062-201ENSMUST00000139696 444 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Mir6420-201ENSMUST00000185032 102 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm29516-201ENSMUST00000190402 468 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Foxc1Q61572 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.49□□□□□ -0.89
Foxc1Q61572 AC134254.4-201ENSMUST00000223086 370 ntBASIC9.49□□□□□ -0.89
Foxc1Q61572 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Foxc1Q61572 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms