Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm14704-201ENSMUST00000120300 874 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm25261-201ENSMUST00000157416 134 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Mir1938-201ENSMUST00000158746 100 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm6222-202ENSMUST00000182143 629 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm16379-201ENSMUST00000161469 348 ntBASIC12.25□□□□□ -0.45
Vsx2Q61412 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm8762-201ENSMUST00000193486 339 ntBASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.25□□□□□ -0.45
Vsx2Q61412 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm9823-201ENSMUST00000051212 327 ntBASIC12.25□□□□□ -0.45
Vsx2Q61412 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx2Q61412 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.25□□□□□ -0.45
Vsx2Q61412 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gm11591-201ENSMUST00000120063 702 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vsx2Q61412 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 Gm38002-201ENSMUST00000193255 180 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx2Q61412 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx2Q61412 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.24□□□□□ -0.45
Vsx2Q61412 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 228.5 ms