Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm13022-201ENSMUST00000121181 285 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm22442-201ENSMUST00000157256 144 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm8342-201ENSMUST00000209839 757 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Col11a1Q61245 Mir6407-201ENSMUST00000184510 101 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.76□□□□□ -0.21
Col11a1Q61245 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.76□□□□□ -0.21
Col11a1Q61245 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col11a1Q61245 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.75□□□□□ -0.21
Col11a1Q61245 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm15036-201ENSMUST00000118880 400 ntBASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm43912-201ENSMUST00000204352 538 ntBASIC13.75□□□□□ -0.21
Col11a1Q61245 Gm19640-201ENSMUST00000214849 464 ntBASIC13.75□□□□□ -0.21
Col11a1Q61245 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.75□□□□□ -0.21
Col11a1Q61245 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col11a1Q61245 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm14807-201ENSMUST00000116640 983 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm11660-201ENSMUST00000120955 412 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm44315-201ENSMUST00000203041 219 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm18204-201ENSMUST00000209835 793 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms