Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Col12a1Q60847 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col12a1Q60847 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm29499-201ENSMUST00000189151 486 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm28329-201ENSMUST00000191208 689 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm29171-201ENSMUST00000191397 486 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm43506-201ENSMUST00000200675 753 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm3726-201ENSMUST00000203110 785 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm14993-201ENSMUST00000121180 164 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm9136-201ENSMUST00000193368 454 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.06□□□□□ -0.48
Col12a1Q60847 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col12a1Q60847 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col12a1Q60847 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm26134-201ENSMUST00000178484 110 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm6644-201ENSMUST00000186507 951 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm39288-201ENSMUST00000210554 446 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms