Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm16479-201ENSMUST00000121706 932 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Mir1938-201ENSMUST00000158746 100 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm17420-201ENSMUST00000164753 153 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm24111-201ENSMUST00000175491 97 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm28693-202ENSMUST00000190758 331 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm37002-201ENSMUST00000194560 373 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm19030-201ENSMUST00000194947 552 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm34165-201ENSMUST00000222012 1174 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Snora73a-201ENSMUST00000082453 205 ntBASIC14.41□□□□□ -0.1
Mkrn3Q60764 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm42683-201ENSMUST00000196136 2328 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm22018-201ENSMUST00000104357 131 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm2231-201ENSMUST00000125661 612 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm16112-201ENSMUST00000159075 382 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm23617-201ENSMUST00000175410 95 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm44038-201ENSMUST00000203952 889 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm45394-201ENSMUST00000209240 1175 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.4□□□□□ -0.1
Mkrn3Q60764 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mkrn3Q60764 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mkrn3Q60764 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mkrn3Q60764 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC14.39□□□□□ -0.11
Mkrn3Q60764 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mkrn3Q60764 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mkrn3Q60764 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms