Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.99□□□□□ -0.49
Nr1h4Q60641 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nr1h4Q60641 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm16215-201ENSMUST00000161990 637 ntBASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm27390-201ENSMUST00000184516 176 ntBASIC11.98□□□□□ -0.49
Nr1h4Q60641 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.98□□□□□ -0.49
Nr1h4Q60641 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nr1h4Q60641 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.97□□□□□ -0.49
Nr1h4Q60641 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Gm6218-201ENSMUST00000219812 628 ntBASIC11.97□□□□□ -0.49
Nr1h4Q60641 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nr1h4Q60641 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms