Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm8018-201ENSMUST00000173536 789 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Mir5132-201ENSMUST00000175166 71 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm27046-201ENSMUST00000182160 463 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm44405-201ENSMUST00000198952 126 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Rps4l-202ENSMUST00000204242 789 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm13570-201ENSMUST00000140763 309 ntBASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm24990-201ENSMUST00000157406 323 ntBASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm16296-201ENSMUST00000159905 325 ntBASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Mir339-201ENSMUST00000083659 96 ntBASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shroom1Q5SX79 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms