Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vps54Q5SPW0 Gm38241-201ENSMUST00000192641 898 ntBASIC15.06■□□□□ 0
Vps54Q5SPW0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Gm6082-201ENSMUST00000215204 454 ntBASIC15.06■□□□□ 0
Vps54Q5SPW0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.06■□□□□ 0
Vps54Q5SPW0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vps54Q5SPW0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.06■□□□□ 0
Vps54Q5SPW0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.06■□□□□ 0
Vps54Q5SPW0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps54Q5SPW0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.05■□□□□ 0
Vps54Q5SPW0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.05■□□□□ 0
Vps54Q5SPW0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.05■□□□□ 0
Vps54Q5SPW0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Vps54Q5SPW0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Vps54Q5SPW0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps54Q5SPW0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps54Q5SPW0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Vps54Q5SPW0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.05■□□□□ -0
Vps54Q5SPW0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.05■□□□□ -0
Vps54Q5SPW0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.05■□□□□ -0
Vps54Q5SPW0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Vps54Q5SPW0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.05■□□□□ -0
Vps54Q5SPW0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps54Q5SPW0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm27320-201ENSMUST00000184892 109 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm28882-201ENSMUST00000185504 314 ntBASIC15.04■□□□□ -0
Vps54Q5SPW0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps54Q5SPW0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps54Q5SPW0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vps54Q5SPW0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps54Q5SPW0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.03■□□□□ -0
Vps54Q5SPW0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.03■□□□□ -0
Vps54Q5SPW0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps54Q5SPW0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms