Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm16296-201ENSMUST00000159905 325 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm26927-201ENSMUST00000182385 965 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm7063-201ENSMUST00000186840 981 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Gm17150-201ENSMUST00000165577 381 ntBASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5d-4Q5R1F6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5d-4Q5R1F6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms