Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim41Q5NCC3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Gm42937-201ENSMUST00000197360 752 ntBASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC21.81■■□□□ 1.08
Trim41Q5NCC3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Trim41Q5NCC3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gm11980-201ENSMUST00000121445 986 ntBASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 CT030637.1-201ENSMUST00000228016 669 ntBASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim41Q5NCC3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Gm18304-201ENSMUST00000189162 546 ntBASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Gm19187-201ENSMUST00000206781 892 ntBASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Gm45550-201ENSMUST00000209380 946 ntBASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 AC102523.2-201ENSMUST00000227813 983 ntBASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim41Q5NCC3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Gm14363-201ENSMUST00000122304 409 ntBASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Gm45598-202ENSMUST00000210719 986 ntBASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim41Q5NCC3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Gm44065-201ENSMUST00000203184 3527 ntBASIC21.78■■□□□ 1.08
Trim41Q5NCC3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms