Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf20Q5DTM8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Gm11964-201ENSMUST00000120982 444 ntBASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Gm19184-201ENSMUST00000196798 928 ntBASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf20Q5DTM8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm7809-201ENSMUST00000153199 742 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm5781-201ENSMUST00000219792 443 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm45930-201ENSMUST00000221330 292 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Daam2-202ENSMUST00000224595 1926 ntBASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf20Q5DTM8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Rubie-203ENSMUST00000227803 2430 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm8738-201ENSMUST00000172606 329 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm8018-201ENSMUST00000173536 789 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms