Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm12390-201ENSMUST00000117897 397 ntBASIC12.43□□□□□ -0.42
Scn2bQ56A07 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm24196-201ENSMUST00000179161 110 ntBASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gm7561-201ENSMUST00000211203 886 ntBASIC12.43□□□□□ -0.42
Scn2bQ56A07 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.43□□□□□ -0.42
Scn2bQ56A07 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scn2bQ56A07 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm22121-201ENSMUST00000175148 54 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm9630-201ENSMUST00000178304 885 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn2bQ56A07 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn2bQ56A07 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms