Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm10434-201ENSMUST00000101158 471 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Esd-ps-201ENSMUST00000170684 847 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm37857-201ENSMUST00000191784 1199 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm37684-201ENSMUST00000192779 355 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Nsd1-205ENSMUST00000224693 852 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gpr87-201ENSMUST00000056898 1080 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm17415-201ENSMUST00000096427 789 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tmem40Q4FJU9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm23673-201ENSMUST00000157474 298 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm22764-201ENSMUST00000158370 92 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm19931-201ENSMUST00000198920 368 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tmem40Q4FJU9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms