Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.81□□□□□ -0.2
Bbof1Q3V079 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.81□□□□□ -0.2
Bbof1Q3V079 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm5370-201ENSMUST00000187187 574 ntBASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm4768-201ENSMUST00000206199 686 ntBASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Bbof1Q3V079 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Bbof1Q3V079 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Mir686-201ENSMUST00000102174 109 ntBASIC13.8□□□□□ -0.2
Bbof1Q3V079 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Gm19163-201ENSMUST00000223313 780 ntBASIC13.8□□□□□ -0.2
Bbof1Q3V079 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.8□□□□□ -0.2
Bbof1Q3V079 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.8□□□□□ -0.2
Bbof1Q3V079 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Bbof1Q3V079 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.8□□□□□ -0.2
Bbof1Q3V079 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gm12957-201ENSMUST00000117835 377 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gm17208-201ENSMUST00000168388 535 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.79□□□□□ -0.2
Bbof1Q3V079 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Bbof1Q3V079 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms