Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim80Q3V061 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trim80Q3V061 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim80Q3V061 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim80Q3V061 Gm13226-201ENSMUST00000117838 404 ntBASIC13.02□□□□□ -0.33
Trim80Q3V061 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim80Q3V061 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Gm45784-201ENSMUST00000188360 142 ntBASIC13.02□□□□□ -0.33
Trim80Q3V061 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim80Q3V061 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim80Q3V061 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim80Q3V061 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim80Q3V061 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm15240-201ENSMUST00000118156 720 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm45331-201ENSMUST00000209868 554 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.01□□□□□ -0.33
Trim80Q3V061 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim80Q3V061 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim80Q3V061 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13□□□□□ -0.33
Trim80Q3V061 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim80Q3V061 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim80Q3V061 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13□□□□□ -0.33
Trim80Q3V061 Gm7067-201ENSMUST00000207698 1249 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms