Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.27□□□□□ -0.12
Gm28047Q3US59 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Gm8018-201ENSMUST00000173536 789 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 Gm18584-201ENSMUST00000203098 964 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.27□□□□□ -0.13
Gm28047Q3US59 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28047Q3US59 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm11591-201ENSMUST00000120063 702 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm12502-201ENSMUST00000120197 444 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm11597-201ENSMUST00000121423 964 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm8227-201ENSMUST00000223306 571 ntBASIC14.26□□□□□ -0.13
Gm28047Q3US59 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28047Q3US59 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm17150-201ENSMUST00000165577 381 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm27243-201ENSMUST00000183964 521 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm40466-201ENSMUST00000212174 422 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms