Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.54□□□□□ -0.56
Nhlrc4Q3UP44 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm9083-201ENSMUST00000120423 819 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm25043-201ENSMUST00000158604 212 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm37489-201ENSMUST00000191883 159 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm6007-201ENSMUST00000208170 823 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc4Q3UP44 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc4Q3UP44 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm6334-201ENSMUST00000207083 228 ntBASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.52□□□□□ -0.57
Nhlrc4Q3UP44 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms