Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nlrc4Q3UP24 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Gm25043-201ENSMUST00000158604 212 ntBASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Gm9022-201ENSMUST00000182482 992 ntBASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nlrc4Q3UP24 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm27243-201ENSMUST00000183964 521 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm37201-201ENSMUST00000191845 523 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm38266-201ENSMUST00000194931 421 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm43758-201ENSMUST00000199500 367 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Olfr582-201ENSMUST00000098212 960 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nlrc4Q3UP24 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms