Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm27631-201ENSMUST00000184163 466 ntBASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm42466-201ENSMUST00000202099 1301 ntBASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gm33142-201ENSMUST00000193913 867 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 AC121804.3-201ENSMUST00000223420 295 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gm15590-201ENSMUST00000078419 552 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms