Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm18935-201ENSMUST00000212692 664 ntBASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm4986-201ENSMUST00000119731 549 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm45331-201ENSMUST00000209868 554 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Morn2-202ENSMUST00000227729 656 ntBASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf44Q3UHJ8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm13297-201ENSMUST00000120205 934 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm14760-201ENSMUST00000121831 999 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Mir8109-201ENSMUST00000184375 117 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf44Q3UHJ8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms