Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sox4Q06831 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox4Q06831 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sox4Q06831 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm11531-201ENSMUST00000117614 555 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Gm12058-201ENSMUST00000118614 437 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm37201-201ENSMUST00000191845 523 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Gm38341-201ENSMUST00000195357 515 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Gm43758-201ENSMUST00000199500 367 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Gm3961-201ENSMUST00000204425 994 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Gm5950-201ENSMUST00000213337 772 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox4Q06831 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sox4Q06831 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox4Q06831 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.36□□□□□ -0.43
Sox4Q06831 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Sox4Q06831 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox4Q06831 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox4Q06831 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox4Q06831 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm25214-201ENSMUST00000104573 129 ntBASIC12.35□□□□□ -0.43
Sox4Q06831 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.35□□□□□ -0.43
Sox4Q06831 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm30285-201ENSMUST00000214614 422 ntBASIC12.35□□□□□ -0.43
Sox4Q06831 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.35□□□□□ -0.43
Sox4Q06831 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.35□□□□□ -0.43
Sox4Q06831 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms