Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm24231-201ENSMUST00000104315 133 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm22018-201ENSMUST00000104357 131 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm14760-201ENSMUST00000121831 999 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Mir7085-201ENSMUST00000184353 66 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.04□□□□□ -0.64
Thbs3Q05895 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.04□□□□□ -0.64
Thbs3Q05895 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Thbs3Q05895 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thbs3Q05895 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Thbs3Q05895 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm10434-201ENSMUST00000101158 471 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm8062-201ENSMUST00000139696 444 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm38002-201ENSMUST00000193255 180 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm43133-201ENSMUST00000197472 463 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.03□□□□□ -0.64
Thbs3Q05895 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.03□□□□□ -0.64
Thbs3Q05895 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.03□□□□□ -0.64
Thbs3Q05895 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thbs3Q05895 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms