Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thumpd3P97770 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Gm10012-201ENSMUST00000078252 192 ntBASIC12.8□□□□□ -0.36
Thumpd3P97770 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.8□□□□□ -0.36
Thumpd3P97770 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thumpd3P97770 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thumpd3P97770 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.8□□□□□ -0.36
Thumpd3P97770 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.8□□□□□ -0.36
Thumpd3P97770 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
Thumpd3P97770 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thumpd3P97770 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.8□□□□□ -0.36
Thumpd3P97770 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm8062-201ENSMUST00000139696 444 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm24196-201ENSMUST00000179161 110 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm29127-201ENSMUST00000188304 517 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm40466-201ENSMUST00000212174 422 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Paupar-201ENSMUST00000194826 3482 ntBASIC12.79□□□□□ -0.36
Thumpd3P97770 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thumpd3P97770 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Thumpd3P97770 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gm22331-201ENSMUST00000158066 136 ntBASIC12.78□□□□□ -0.36
Thumpd3P97770 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gm17420-201ENSMUST00000164753 153 ntBASIC12.78□□□□□ -0.36
Thumpd3P97770 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thumpd3P97770 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.78□□□□□ -0.36
Thumpd3P97770 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Thumpd3P97770 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thumpd3P97770 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms