Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm20482-202ENSMUST00000174729 825 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm27320-201ENSMUST00000184892 109 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.9□□□□□ -0.5
Nkx3-2P97503 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx3-2P97503 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.9□□□□□ -0.51
Nkx3-2P97503 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx3-2P97503 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx3-2P97503 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Nkx3-2P97503 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx3-2P97503 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx3-2P97503 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm15236-201ENSMUST00000117309 379 ntBASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm25668-201ENSMUST00000157700 129 ntBASIC11.89□□□□□ -0.51
Nkx3-2P97503 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.89□□□□□ -0.51
Nkx3-2P97503 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx3-2P97503 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms